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External endpointresponds

protein-mcp-server

Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models.

Endpoint URL
https://protein.caseyjhand.com/mcp
Current status
responds
Last checked
Aug 17, 2026, 05:06 AM UTC
Check
MCP initialize · 8s limit
Latency
455 ms
Response record
4 of 4 rounds
Transport
streamable-http
Source
mcp_registry
Registry name
io.github.cyanheads/protein-mcp-server

Current observation

This endpoint answered at its latest recorded check.

What this server reports about itself

Self-reported at initialize. Not verified by Licium.

Server name
protein-mcp-server
Version
0.5.1
Capability keys
logging, resources, tools, prompts
Tool names
protein_search_structures, protein_get_structure, protein_find_similar, protein_track_ligands, protein_compare_structures, protein_analyze_collection, protein_get_annotations
Instructions excerpt

protein-mcp-server federates experimental (PDB) and predicted (AlphaFold) protein structures: search structures by text, sequence, or organism/method/resolution (protein_search_structures); fetch metadata and coordinate URLs for PDB IDs or UniProt accessions (protein_get_structure); find sequence or fold homologs via mmseqs2 or Foldseek (protein_find_similar); resolve ligands and map binding-site residues (protein_track_ligands); align 2–10 structures with TM-align or jFATCAT (protein_compare_structures); profile the PDB with server-side facet distributions and trends (protein_analyze_collection); and pull UniProt features plus InterPro domains and GO terms (protein_get_annotations).

Reported Aug 17, 2026, 05:06 AM UTC.

Check history

Oldest to newest. Each row is one recorded check.

  1. responds
    MCP initialize · 8s limit · HTTP 200 · 171ms
  2. responds
    MCP initialize · 8s limit · HTTP 200 · 344ms
  3. responds
    MCP initialize · 8s limit · HTTP 200 · 297ms
  4. responds
    MCP initialize · 8s limit · HTTP 200 · 455ms
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